CDS
| Accession Number | TCMCG065C19776 |
| gbkey | CDS |
| Protein Id | XP_004970555.1 |
| Location | join(41257612..41258274,41258993..41260518,41260877..41261018,41261120..41261227,41261399..41261611,41261698..41261808,41269230..41269424,41269968..41270142,41270256..41270293) |
| Gene | LOC101767746 |
| GeneID | 101767746 |
| Organism | Setaria italica |
Protein
| Length | 1056aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA207554 |
| db_source | XM_004970498.3 |
| Definition | pumilio homolog 2 [Setaria italica] |
EGGNOG-MAPPER Annotation
| COG_category | J |
| Description | Pumilio-family RNA binding repeat |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] |
| KEGG_ko |
ko:K17943
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway | - |
| GOs |
GO:0003674
[VIEW IN EMBL-EBI] GO:0003676 [VIEW IN EMBL-EBI] GO:0003723 [VIEW IN EMBL-EBI] GO:0003729 [VIEW IN EMBL-EBI] GO:0003730 [VIEW IN EMBL-EBI] GO:0005488 [VIEW IN EMBL-EBI] GO:0005575 [VIEW IN EMBL-EBI] GO:0005622 [VIEW IN EMBL-EBI] GO:0005623 [VIEW IN EMBL-EBI] GO:0005737 [VIEW IN EMBL-EBI] GO:0005829 [VIEW IN EMBL-EBI] GO:0005886 [VIEW IN EMBL-EBI] GO:0016020 [VIEW IN EMBL-EBI] GO:0044424 [VIEW IN EMBL-EBI] GO:0044444 [VIEW IN EMBL-EBI] GO:0044464 [VIEW IN EMBL-EBI] GO:0071944 [VIEW IN EMBL-EBI] GO:0097159 [VIEW IN EMBL-EBI] GO:1901363 [VIEW IN EMBL-EBI] |
Sequence
| CDS: ATGATGAGCGCCAGCGCCGTGGCGATGCGTGCGGAGATGGGCGGCGGCGGTGGGGAGGGAGAGCTGGAGGACGAGCTTGACGCGCTGCTTAGTTCCGGCGCCGGTGGTCAGCGGCGGCGCCCGGTAGACGCGGGCGAAAGGGAGCGGGAGCGTGAACTCAGCATGTTCAGGAGCGGGTCGGCGCCGCCGACCATAGAGGGTTCCCTGAACGCCATCAGCGGCCTGCTCCGCGGCGACGCGGAGGCTGCGGTGACGGCTGCCCCGATTCCTGTTGCTGAGGCGTTGAATGGGCATGGTGGCCTCCTCTCGGAGGAGGAGCTCCGAGCCGACCCAGCCTACCTGTCGTACTACTACTCTCACGGAAATCTGAACCCGCGGCTGCCGCCTCCGGTGCTGTCCAAGGAGGATTGGCGGTCAACCCAGCGCCTGAAAGCTGGGGTGGTTGGGGGGATTGGGGACAGGAGGAAGGTGGGGCAAGAGGACGCGGTACAGGGGACGGGGACTGCAGTGGGTAGGTCTCTATTTCCGCAGCATCCTGGTTCTGAGCAGGAGGAGGAAGCCAGGGTTGATGGTGGTGGTGCTGCTGAGTGGGTGGATGGTGGAGGGGATGGGCTCATTGGTTTATCGCTCGGGCGGCAGCGTAGCTTCGCGGATATCCTGCAGGACAATATTGGGCGCAGAACACCTACTTCAGAGCATCCCTCCCGTGCGGCCAGTCGCAATTCTTTTCTTGACAATCAAGAACCAGTGGATTCTGCTGAGAACCAATATTCTGTGCATACTGATATTTTGGAAGCTCATCATCCTGTTGGGAATGTGCAAAATGTCGGTGGTCGTCACAGTCTTAATGCATCCACATCTCAGACGTTTGCATCTATTCTGGGTTCATCTGTTTCCAGAAATGCTACACCAGATCCTCATTATGTTGCAAGGGTTCCTAGTCCTGGCCTTCCACCTGTTGGTGTTAGGATTACTTCCAATGAGAAGAAACTGAATTGCTCCTCTTCGCCATTCAACACTGTATCCTCAAAAGCAGTTGGGGCTGATGATATTTTATCTGCATTGTCAAGCATGAACTTATCAAAAGGTGGTACCTTGAATGGTAATAACAACATCAGTCGATCAAACTTTCAGAGAGGGACAAGTGATCAGCAGAAATTTTCTCTTGACTCACAAGCTGGAGCTGCCCAAGTCAATAATAAGCAGCATCCTGTGATGTTAGGAACTGATGATGAATATTTGGGTATGCCATCGATGTCACAACCATCTAATACTTCTTTTGCTGACGTTAACAACAGCATGGCTGGTTTAGCAGAGTTAAGAAATAGTACCAACACAAGATCAGATGGACATTTGGAAATGCAAAGATCTTCTACTTTATCTGCTCGTTCATATCAGAAGTCCCCATCATCTTCTAATGAAAGCCCGGGTGGTTCTCCTGCTCAACATCAGAATTTTGATGGTATAAATTCAGCCTTTTTGAACTATGGGCTTAGTGGATATCCACTCAGCCCAGGTTTGCCTTCTATGATGCCCCCTTTGTTTGAAAGTGCTGCTGCTGCATCTGCTATAGCTTCACTTGGTGCAGATTCAAGAAACCTTGGAAACAATATTTTAGCTTCACCTACGTTGAGCCTAACAGATGTTCATAACCTTGGTCGAGGTGGTAATCAAGCTCCCACAGGTCTTCAGTCTCCTCTTTCTGACCCGTTTTATGTCCAGTACTTGAAGGCAACGCAGTATGCAACACAGGGAGCTGGCAGCTATGGTGATCCTTCCTTGGAAAGAGGTTACATGGGTAACTCATATGGTAATTTAACTGCAGTTCAAAAAGCTTATATTGAAGCTTTGCTTCAGCAGCAGAAGCAATATGAAATGCCACTTTTAGGTAAATCAAACGCTTCAAATCATGGGTACTATGGCAATTTACCTTTTGGCATGGGCATGGCATACCCAGGAAGCCCATTGGGCAGTCCAGTTGCTTCTCCATCTGGTCCTGGCAGTCCACTAAGGCTTGGTGAGCGGAATCTGAGATTTCCTTCTAACTTAAGAAACTTGGGTGGATGGACCTCTGATCCAAGTGGCTACATGAATGAGAACTTTCCATCCTCACTTCTGGATGAGTTTAAAAGTAACAAGGCGAGAAGTTTTGAGCTTGCTGAGATCGCTGGGCATGTGGTTGAGTTTAGTGCTGACCAATATGGAAGCCGTTTCATACAGCAAAAGCTCGAAACCGCAACAGTCGAGGAAAAGAACATGGTCTTCGAGGAGATCATGCCTCATGCACTATCATTGATGACTGATGTATTTGGAAATTATGTGGTACAGAAGTTTTTTGAGCATGGAAGCGCAGAACAACGGAGGGAGTTGGCTGATAAACTGTTTGGCCATGTATTAGCTCTCAGTCTTCAGATGTATGGATGCCGAGTTATCCAAAAGGCAATAGAGGTGGTTGATCTGGACCAGAAAACAAAGATGGTTACCGAGCTTGATGGTCATATCATGAAATGTGTACGTGATCAAAATGGAAACCATGTCATCCAGAAATGTATTGAACGTGTCCCAGAAGATTCTATTCAGTTTGTAATATCAACATTCTATGGTCATGTTGTTCCATTATCCACCCACCCTTACGGCTGCAGAGTCATTCAGAGAGTACTTGAACACTGTGCTGATCCAAAAACACAGCAAATAGTCATGGATGAGATATTGCAATCTGTATGCATGTTGGCACAGGATCAATACGGAAACTATGTTGTCCAGCATGTTTTGGAGCACGGGAAGCCTCACGAAAGATCCATCATTATTGAAAAATTAGCTGGACAGATCATTCAGATGAGCCAACAGAAATTTGCCTCGAATGTTGTTGAGAAGTGTCTAACATTCGGCGGACCTACAGAGCGAGAAGTTCTCATAAATGAAATGCTTGGTACCACTGATGAGAATGAGCCTCTACAGGCCATGATGAAGGATCAGTTTGGTAACTATGTTGTACAGAAGGTACTTGAGACTTGTGATGATCAGCAACGTGAGTTGATCCTGTCACGGGTAAAGGTCCACTTAAATGCTCTGAAGAAATATACATATGGGAAGCACATAGTTGCTCGTGTAGAGAAACTTGTTGCTGCTGGTGAGAGGAGGATTGGACTTCAATCACAAAATCCTTCTTGA |
| Protein: MMSASAVAMRAEMGGGGGEGELEDELDALLSSGAGGQRRRPVDAGERERERELSMFRSGSAPPTIEGSLNAISGLLRGDAEAAVTAAPIPVAEALNGHGGLLSEEELRADPAYLSYYYSHGNLNPRLPPPVLSKEDWRSTQRLKAGVVGGIGDRRKVGQEDAVQGTGTAVGRSLFPQHPGSEQEEEARVDGGGAAEWVDGGGDGLIGLSLGRQRSFADILQDNIGRRTPTSEHPSRAASRNSFLDNQEPVDSAENQYSVHTDILEAHHPVGNVQNVGGRHSLNASTSQTFASILGSSVSRNATPDPHYVARVPSPGLPPVGVRITSNEKKLNCSSSPFNTVSSKAVGADDILSALSSMNLSKGGTLNGNNNISRSNFQRGTSDQQKFSLDSQAGAAQVNNKQHPVMLGTDDEYLGMPSMSQPSNTSFADVNNSMAGLAELRNSTNTRSDGHLEMQRSSTLSARSYQKSPSSSNESPGGSPAQHQNFDGINSAFLNYGLSGYPLSPGLPSMMPPLFESAAAASAIASLGADSRNLGNNILASPTLSLTDVHNLGRGGNQAPTGLQSPLSDPFYVQYLKATQYATQGAGSYGDPSLERGYMGNSYGNLTAVQKAYIEALLQQQKQYEMPLLGKSNASNHGYYGNLPFGMGMAYPGSPLGSPVASPSGPGSPLRLGERNLRFPSNLRNLGGWTSDPSGYMNENFPSSLLDEFKSNKARSFELAEIAGHVVEFSADQYGSRFIQQKLETATVEEKNMVFEEIMPHALSLMTDVFGNYVVQKFFEHGSAEQRRELADKLFGHVLALSLQMYGCRVIQKAIEVVDLDQKTKMVTELDGHIMKCVRDQNGNHVIQKCIERVPEDSIQFVISTFYGHVVPLSTHPYGCRVIQRVLEHCADPKTQQIVMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERSIIIEKLAGQIIQMSQQKFASNVVEKCLTFGGPTEREVLINEMLGTTDENEPLQAMMKDQFGNYVVQKVLETCDDQQRELILSRVKVHLNALKKYTYGKHIVARVEKLVAAGERRIGLQSQNPS |